PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028052560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | TCP | ||||||||
Protein Properties | Length: 150aa MW: 16665.9 Da PI: 8.4885 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 48.8 | 2.6e-15 | 26 | 89 | 8 | 71 |
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssas 71 ++ h v+gR RRvRls +c r+ +L+ +LG+ ++++tieW l q ++i ++ g +++ ++ XP_028052560.1 26 LKDPHVMVNGRHRRVRLSDKCDERINQLTSRLGHRTKGQTIEWPLYQVRHSINAIFGIDTDLKT 89 5889999************************************************998444432 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MTLPSSSKNQ PKPKSLKASH CPHKPLKDPH VMVNGRHRRV RLSDKCDERI NQLTSRLGHR 60 TKGQTIEWPL YQVRHSINAI FGIDTDLKTS PTPNEAEAMP VLPEITAVSG SGPGLAPTST 120 STPPCYSNEL VTYSELDLAF EEIEKYFGPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72010.1 | 6e-14 | TCP family protein |