PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028052393.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 695aa MW: 79387.5 Da PI: 6.7365

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028052393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	49.4	8.7e-16	509	552	5	48
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 isledl+++F +++ dAAk+Lg++ +++Kr+CR+y+I W Rk XP_028052393.1 509 ISLEDLQQHFGMKLDDAAKSLGISRSTVKRACREYNITWWSPRK 552 89**************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MAEIGFFLRT ENRTDDDDDM IRDFPHDFKS YVKNHQLLCQ RGDYNIGWVF SSCERLPPPP 60 PFSGNLQNHT DIIDETLIAA YPQFIDALKN LFREIILKSA AQVLVQFWKV IEIGGKRLLT 120 IQHQPFSLSY IDEGLCLYRL MSLDNECYVD GESEEDLGLL NRVFRHQQEE STPNVRYYSC 180 KEYPQRDHAI VCNIWGSRAI PLFEPSRQDC VGVLEIVTTI EVSKFFYLLE LSVYVKGGGL 240 RSSKCDHLYY EKDNVETPKD IKKMLEMVCS THYLPLAQTW VLCRLCNVVS RNCTTYHREK 300 DKFHFLHTCS LHNLQKGQGV VGRAVLSQNL VFCKDITQFS ITQYPLAHYA REHGLKGCFA 360 ICMRSSYTGD NVYVLEFFLP PNYTKGGDPR IALVPLLTTM KKDCKSLKVA SGEELGEKLS 420 IEVLDFSEDG KLYSFQIPQT ARSPIRMENG EEMVFLDLSD QQLPKVDAID TRNNVVSNSE 480 ENNIVVTSSH QQCIINSSQR PQRKAGIPIS LEDLQQHFGM KLDDAAKSLG ISRSTVKRAC 540 REYNITWWSP RKRSKDNHLL SNKLVQAAVQ EQIGEPSQPP ISDPPRKQDV ATASRPKPRF 600 TVAQDTSVAT IKAKYGDDFI RFQLPVLSGM IEFQQQVAKR LNLKGGTYRV KYQDEDNDWI 660 LIACDEDLQN YICNSISQGR NTVTMLLQSI TNCPP

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MAEIGFFLRT ENRTDDDDDM IRDFPHDFKS YVKNHQLLCQ RGDYNIGWVF SSCERLPPPP  60
PFSGNLQNHT DIIDETLIAA YPQFIDALKN LFREIILKSA AQVLVQFWKV IEIGGKRLLT  120
IQHQPFSLSY IDEGLCLYRL MSLDNECYVD GESEEDLGLL NRVFRHQQEE STPNVRYYSC  180
KEYPQRDHAI VCNIWGSRAI PLFEPSRQDC VGVLEIVTTI EVSKFFYLLE LSVYVKGGGL  240
RSSKCDHLYY EKDNVETPKD IKKMLEMVCS THYLPLAQTW VLCRLCNVVS RNCTTYHREK  300
DKFHFLHTCS LHNLQKGQGV VGRAVLSQNL VFCKDITQFS ITQYPLAHYA REHGLKGCFA  360
ICMRSSYTGD NVYVLEFFLP PNYTKGGDPR IALVPLLTTM KKDCKSLKVA SGEELGEKLS  420
IEVLDFSEDG KLYSFQIPQT ARSPIRMENG EEMVFLDLSD QQLPKVDAID TRNNVVSNSE  480
ENNIVVTSSH QQCIINSSQR PQRKAGIPIS LEDLQQHFGM KLDDAAKSLG ISRSTVKRAC  540
REYNITWWSP RKRSKDNHLL SNKLVQAAVQ EQIGEPSQPP ISDPPRKQDV ATASRPKPRF  600
TVAQDTSVAT IKAKYGDDFI RFQLPVLSGM IEFQQQVAKR LNLKGGTYRV KYQDEDNDWI  660
LIACDEDLQN YICNSISQGR NTVTMLLQSI TNCPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	3e-90	Nin-like family protein