PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028052106.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 668aa MW: 74779.2 Da PI: 5.1194

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028052106.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	57	3.9e-18	485	531	6	52
RWP-RK 6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ed+ ++ +l++++AAk+L+v+ ++LKr CR +GI+RWP Rki+++ XP_028052106.1 485 PPEDMLQNSELSLENAAKSLKVSKSTLKRVCRTFGIERWPPRKINKV 531 5578889999***********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MNISNLNKTI RDLLYSYSFI RHWIRRPILV QFWAPITTKE GRSFLTTRNQ PFSLNTLFCD 60 YEVIEGLCGY RMICMDSKFD IDLDGGTSLP GRVFKHQFPE STPNVEFYSI TEYPQRDGAL 120 RCGVRQSLAF PVFESSTQRC VGVIEVVSPV EEKSLICNDL FRYRIYEDFE KKGLKCSVGF 180 DHKDMALDEA QNEAHTVALD EIKNVLKVVC EVYDLPLAQV WVPCKVGWPC RPLVDGGVLG 240 GCCYYYKDDY GEDEDDYGDN DGAFRYISSL FHLKNGVGVV GRALLSTNMV FCRDVTQLSL 300 TEYPLAHYAL KARLSGCFAI CLDSNCTGND VYVLEFFMPM SNNASENPHT SLRKIWETMR 360 ENFQTLRIAS GEELGEELRI EEIPIQNGGE LDIVQMPQTT ISLPRSEPLQ SEFEVMQVDS 420 SDQQLVNAIN TGSNVGCTEQ NNFAVTCTQG KSTVKVSKRK GDKSGGTVKM SKRDGNNIGV 480 KIKIPPEDML QNSELSLENA AKSLKVSKST LKRVCRTFGI ERWPPRKINK VGCSQLDASA 540 LCVDLEQSSL LNHDHLPSAQ PSATIVHTVP HDMTMQDANV VTMKAKYAEG NAIKFRLSSS 600 SGLTELQQEV AQRLSLEAGT YCVKYKDEDG DLILIACDGD LRDYMGTCEG KTCIVVLLEP 660 KLPITDHL

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MNISNLNKTI RDLLYSYSFI RHWIRRPILV QFWAPITTKE GRSFLTTRNQ PFSLNTLFCD  60
YEVIEGLCGY RMICMDSKFD IDLDGGTSLP GRVFKHQFPE STPNVEFYSI TEYPQRDGAL  120
RCGVRQSLAF PVFESSTQRC VGVIEVVSPV EEKSLICNDL FRYRIYEDFE KKGLKCSVGF  180
DHKDMALDEA QNEAHTVALD EIKNVLKVVC EVYDLPLAQV WVPCKVGWPC RPLVDGGVLG  240
GCCYYYKDDY GEDEDDYGDN DGAFRYISSL FHLKNGVGVV GRALLSTNMV FCRDVTQLSL  300
TEYPLAHYAL KARLSGCFAI CLDSNCTGND VYVLEFFMPM SNNASENPHT SLRKIWETMR  360
ENFQTLRIAS GEELGEELRI EEIPIQNGGE LDIVQMPQTT ISLPRSEPLQ SEFEVMQVDS  420
SDQQLVNAIN TGSNVGCTEQ NNFAVTCTQG KSTVKVSKRK GDKSGGTVKM SKRDGNNIGV  480
KIKIPPEDML QNSELSLENA AKSLKVSKST LKRVCRTFGI ERWPPRKINK VGCSQLDASA  540
LCVDLEQSSL LNHDHLPSAQ PSATIVHTVP HDMTMQDANV VTMKAKYAEG NAIKFRLSSS  600
SGLTELQQEV AQRLSLEAGT YCVKYKDEDG DLILIACDGD LRDYMGTCEG KTCIVVLLEP  660
KLPITDHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	2e-73	Nin-like family protein