PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051889.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 984aa MW: 109880 Da PI: 7.3626

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.9	3e-09	234	288	22	76
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 +rgk ++ + +ev++++ ++g++r +k+ kw+n+ ++++k+ e+e++++ e+ XP_028051889.1 234 SRGKTRADKDREVAEFLNRHGVNRDAKTAGTKWDNMLGEFRKVHEWERGGEREHI 288 57888899999*************************************9976665 PP

Sequence ? help Back to Top
Protein Sequence Length: 984 aa Download sequence
MMGDNKGETT KKQQQHLSSP SPSPKDPVEE STETRQPPPP PPQHLHQPPS SAVVVTGAPT 60 FIPAPLFIPI NLTSSATFEQ QQQQQFEAVN PKRARYTSAQ WKQLPSPSPS QSQQQRHTQM 120 NILSSESSPS PSKHITTKPA SSSDTASSPS QSPRPSLSAA SGQETSKPEG GDQFDHQFRK 180 GKYVSPVWKP NEMLWLARAW RVQYQGGSDG SGSSSKSEPP QGAPATGADV AVPSRGKTRA 240 DKDREVAEFL NRHGVNRDAK TAGTKWDNML GEFRKVHEWE RGGEREHIGK SYFRLSPYER 300 KLHRLPASFD EEVFEELSQF MGSRMRTPQS RTAIVSGEAL TAAIKTLPPP PPFGEEEFSF 360 SAGRAKQLVM KSGGETFLHG SRGSLLGFDA SSLDVSGPSG STSSKEFRRI GKIRMIWEEL 420 VSLWAEEGEH HRGRVKIQGS NFLNADELTF LDDSMVACTM EAFEDGALKG FSVDRFVAGQ 480 QVKVFGRRKS SSAPAPSGSN ERAQLTSTEP SIRSIPPWEF QDPTEYYVGC LRVPPPTLPS 540 LYELSWYLQE PPPEELRFPL RKDIYRDLPQ GKELFFTTSS ELLDCRGITF DLLGPIIRSN 600 PSPSGGTASS RDSFIGLWDD CINRVVSKLC PVEMVLVRKS SSLLAETLQD QWPNVTGFVR 660 NFCLWRGEES DQLREGYLDP SSSIVEKLLW SYVDLPYILG YYAVGYMVTF CALSQSQDRL 720 IRTDLYTLDL STPAERLKAL VPCWRIAGLL PLLADRCFNY INNGNNYKLF PYSDFERIDH 780 GNGNVIEMTP NTVTKFFSSK RKWAAVKEIY DFLEHRIPHI EYLERSSEKD LGLIFKPRGC 840 KLKPANCDQL VEALRHVTKA LVALHDLSFM HRDLGWDKVM RSDRENEWFI SGFEEAVGAP 900 QIYPHGTASG RHAPEMGRGL HGVKVDVWGV GQLVKTCGLV GVPKLLRDLQ NRCLDHNPEQ 960 RPTAADCYHH LLQLQSSLSA TGGY

Sequence ? help Back to Top

Protein Sequence Length: 984 aa Download sequence

MMGDNKGETT KKQQQHLSSP SPSPKDPVEE STETRQPPPP PPQHLHQPPS SAVVVTGAPT  60
FIPAPLFIPI NLTSSATFEQ QQQQQFEAVN PKRARYTSAQ WKQLPSPSPS QSQQQRHTQM  120
NILSSESSPS PSKHITTKPA SSSDTASSPS QSPRPSLSAA SGQETSKPEG GDQFDHQFRK  180
GKYVSPVWKP NEMLWLARAW RVQYQGGSDG SGSSSKSEPP QGAPATGADV AVPSRGKTRA  240
DKDREVAEFL NRHGVNRDAK TAGTKWDNML GEFRKVHEWE RGGEREHIGK SYFRLSPYER  300
KLHRLPASFD EEVFEELSQF MGSRMRTPQS RTAIVSGEAL TAAIKTLPPP PPFGEEEFSF  360
SAGRAKQLVM KSGGETFLHG SRGSLLGFDA SSLDVSGPSG STSSKEFRRI GKIRMIWEEL  420
VSLWAEEGEH HRGRVKIQGS NFLNADELTF LDDSMVACTM EAFEDGALKG FSVDRFVAGQ  480
QVKVFGRRKS SSAPAPSGSN ERAQLTSTEP SIRSIPPWEF QDPTEYYVGC LRVPPPTLPS  540
LYELSWYLQE PPPEELRFPL RKDIYRDLPQ GKELFFTTSS ELLDCRGITF DLLGPIIRSN  600
PSPSGGTASS RDSFIGLWDD CINRVVSKLC PVEMVLVRKS SSLLAETLQD QWPNVTGFVR  660
NFCLWRGEES DQLREGYLDP SSSIVEKLLW SYVDLPYILG YYAVGYMVTF CALSQSQDRL  720
IRTDLYTLDL STPAERLKAL VPCWRIAGLL PLLADRCFNY INNGNNYKLF PYSDFERIDH  780
GNGNVIEMTP NTVTKFFSSK RKWAAVKEIY DFLEHRIPHI EYLERSSEKD LGLIFKPRGC  840
KLKPANCDQL VEALRHVTKA LVALHDLSFM HRDLGWDKVM RSDRENEWFI SGFEEAVGAP  900
QIYPHGTASG RHAPEMGRGL HGVKVDVWGV GQLVKTCGLV GVPKLLRDLQ NRCLDHNPEQ  960
RPTAADCYHH LLQLQSSLSA TGGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	9e-08	Trihelix family protein