PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028051762.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HD-ZIP
Protein Properties Length: 306aa    MW: 34506 Da    PI: 4.4252
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028051762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.23.8e-2082135356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++t++q++ Le+ Fe ++++  e++ +LAk lgL+ rqV +WFqNrRa++k
  XP_028051762.1  82 KKRRLTPDQVQFLERNFEADNKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 135
                     5678*************************************************9 PP
2HD-ZIP_I/II127.17.6e-4181171191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     ekkrrl+ +qv++LE++Fe+++kLeperK +la++Lglqprqva+WFqnrRAR+ktk+lEkdyeaL+++y++lk++ + L ke+++L++++
  XP_028051762.1  81 EKKRRLTPDQVQFLERNFEADNKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKHLEKDYEALQASYNSLKADYDGLVKEKDKLKAKV 171
                     69**************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MAARRVVYAA SVAGSNSNTV LLQSPNSLFL SGSSPSFLGS SSMVSFKDGN LGKRSERSFF  60
CSFDQEDNED DELDEYFQQP EKKRRLTPDQ VQFLERNFEA DNKLEPERKI QLAKDLGLQP  120
RQVAIWFQNR RARWKTKHLE KDYEALQASY NSLKADYDGL VKEKDKLKAK VLHLTDELLT  180
KNQSEAPLQE LTADSVSEDE VSKISIAACK QDDLTSAKSD ELDSGSPCHL DGSHSSLLEP  240
GDSSYVFEPD QSDLSQDEED HFCKNLLPPP AYLYPKIDDG GYPDPSANSC YFGFPVEDHT  300
FEFWSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.17e-44HD-ZIP family protein