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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028051280.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 344aa MW: 38671.8 Da PI: 8.521 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.1 | 2.9e-15 | 39 | 98 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_028051280.1 39 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqkKKgRQVYLGAYDDEETAAHAYDMAALKYWG 98 57*******************999977776447*************************98 PP | |||||||
2 | AP2 | 51.3 | 2.9e-16 | 141 | 192 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_028051280.1 141 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 192 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MAKISQKNTS NTSSNSKPAT KAKRTRKSVP RESPPQRSSI YRGVTRHRWT GRYEAHLWDK 60 NCWNESQKKK GRQVYLGAYD DEETAAHAYD MAALKYWGQD TILNFPLSTY QEELKGMESQ 120 SKEEYIGSLR RKSSGFSRGV SKYRGVARHH HNGRWEARIG RVFGNKYLYL GTYATQEEAA 180 TAYDMAAIEY RGLNAVTNFD LSRYIKWLRP NQNTTNNPQP NPNHSVDLTN PSNEVGLGFL 240 YQQSSSFATE ATLVPPRPAG GATASSALGL LLQSSKFKEM LERTSVVDCP STPLESDPPR 300 SSFPDDIQTY FDCQDASSYG EGDDIIFGEL NSFASPMFQC ELDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 1e-113 | AP2 family protein |