PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051187.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 447aa MW: 49831 Da PI: 8.8222

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.5	3.1e-18	227	273	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l+++v+q+G + W+ Ia+ m gR +kqc++rw+++l XP_028051187.1 227 KGQWTDEEDRKLLNLVTQHGVRKWAQIAENMV-GRAGKQCRERWHNHL 273 799***************************.***********97 PP
2	Myb_DNA-binding	59.3	8.5e-19	279	321	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ WT+eE+ +lv+a+k+ G++ W+ Ia++++ gRt++++k++w+ XP_028051187.1 279 KDTWTEEEESILVEAHKKVGNR-WAEIAKRIP-GRTENSIKNHWN 321 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MALESRLFSA RHCIQPPPDQ VCCVISVIVS LTFGLSHGWF LANCWGVGVF LANCWVLTYC 60 SLSGIKLLHF INLCAVVSSS PSSLSFMEGA GGGGFGYVNL QNNLSLYRPS PPLTAIERFL 120 SSKNNHFSHK QTQNNVHNQG LLVPASVYGG FSSSGGAIGG YSSDFLGPSF SKNSFMDGLF 180 HDSETLKWTY EIDPNMGLRE DDKSTERNCK RVAKRAKCGS STTTLIKGQW TDEEDRKLLN 240 LVTQHGVRKW AQIAENMVGR AGKQCRERWH NHLRPDIKKD TWTEEEESIL VEAHKKVGNR 300 WAEIAKRIPG RTENSIKNHW NATKRKQNSR RNNIKKPQGG QNWKSQSQPT ILQEYIKSMN 360 PSNTAATTTG STVTEDFSTH FAPLGDLSES SIDDSPQFMN KTFDDELNFM INFFGTKNDQ 420 PLNDKNNSKA SIEAKTAQNN HSTSVLP

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MALESRLFSA RHCIQPPPDQ VCCVISVIVS LTFGLSHGWF LANCWGVGVF LANCWVLTYC  60
SLSGIKLLHF INLCAVVSSS PSSLSFMEGA GGGGFGYVNL QNNLSLYRPS PPLTAIERFL  120
SSKNNHFSHK QTQNNVHNQG LLVPASVYGG FSSSGGAIGG YSSDFLGPSF SKNSFMDGLF  180
HDSETLKWTY EIDPNMGLRE DDKSTERNCK RVAKRAKCGS STTTLIKGQW TDEEDRKLLN  240
LVTQHGVRKW AQIAENMVGR AGKQCRERWH NHLRPDIKKD TWTEEEESIL VEAHKKVGNR  300
WAEIAKRIPG RTENSIKNHW NATKRKQNSR RNNIKKPQGG QNWKSQSQPT ILQEYIKSMN  360
PSNTAATTTG STVTEDFSTH FAPLGDLSES SIDDSPQFMN KTFDDELNFM INFFGTKNDQ  420
PLNDKNNSKA SIEAKTAQNN HSTSVLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	1e-69	MYB family protein