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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc070541.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 175aa MW: 19788.5 Da PI: 7.3903 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 78.2 | 6e-25 | 9 | 57 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 k ie+ks rqvtfskRr+g++KKA LSvLCd+++avi+fs gklye Cse_sc070541.1_g010.1 9 KLIEDKSSRQVTFSKRRTGLMKKARHLSVLCDVDIAVIVFSALGKLYES 57 569********************************************95 PP | |||||||
2 | K-box | 17.5 | 1.7e-07 | 106 | 161 | 29 | 84 |
K-box 29 enLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 e Lq+ R + ++ e Ls+ ++ +Le +L+ +l + R +K l l +++++++ Cse_sc070541.1_g010.1 106 ELLQTVDRLVEENNSEGLSVTDMTELELELDAALVQTRLRKRTLTLIDVDTMRRRV 161 55665555555566688************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MGRKKLEMKL IEDKSSRQVT FSKRRTGLMK KARHLSVLCD VDIAVIVFSA LGKLYESCSG 60 SSSNSVEHML SRYERSITEE GERTNNGAGG QLEVLSQCTK FRTCKELLQT VDRLVEENNS 120 EGLSVTDMTE LELELDAALV QTRLRKRTLT LIDVDTMRRR VGIERNDMHA SDTSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65050.1 | 1e-31 | MIKC_MADS family protein |