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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc036426.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 258aa MW: 30336 Da PI: 9.4912 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.2 | 3e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrng+lKKA+ELSvLCdaeva++ifs++gklye+ss Cse_sc036426.1_g010.1 9 KRIENTTSRQVTFSKRRNGLLKKAYELSVLCDAEVALMIFSQKGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 53.9 | 7.7e-19 | 143 | 205 | 35 | 97 |
K-box 35 qRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 R++lG+dL s+sl eL +L ++Le+ l++iR++K +l++eqi++l+ ke+ l een +L ++ Cse_sc036426.1_g010.1 143 ARKFLGQDLVSCSLGELSELDSKLEHTLRTIRARKAQLFKEQIDKLKSKERYLLEENARLCQE 205 49********************************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MVRGKVELKR IENTTSRQVT FSKRRNGLLK KAYELSVLCD AEVALMIFSQ KGKLYEFSSS 60 NMQKTIEKYR DHVKKDENCN PEMEVNTQQL KDEAAIIQQK IEQLEASQRF FLRHYFPLRP 120 IILLFTLSLE YFFSHYNWIL CMARKFLGQD LVSCSLGELS ELDSKLEHTL RTIRARKAQL 180 FKEQIDKLKS KERYLLEENA RLCQENTSLS QKRVVNPPQQ HSMKQKDAAI CSHASRQFSD 240 VETELFVGLR LYQNAREL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 3e-70 | MIKC_MADS family protein |