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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc035291.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 240aa MW: 26931.6 Da PI: 8.0442 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 74.7 | 7.2e-24 | 10 | 56 | 2 | 48 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48 i++ks rqvtfskRr+g++KKA LSvLCd+++av++fs +gkly Cse_sc035291.1_g020.1 10 LIQDKSSRQVTFSKRRTGLMKKARQLSVLCDVDIAVLVFSAQGKLYQ 56 699******************************************96 PP | |||||||
2 | K-box | 21 | 1.4e-08 | 106 | 159 | 29 | 82 |
K-box 29 enLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqk 82 e Lq+ R + ++ e+Ls+ ++ +Le +L+ +l + R +K++l++e +++lq Cse_sc035291.1_g020.1 106 ELLQTVDRLVEENNSEELSVTDMTELELELNAALVQTRLRKTQLMTEYMSTLQA 159 55565555555566689*********************************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MGRRKLEMKL IQDKSSRQVT FSKRRTGLMK KARQLSVLCD VDIAVLVFSA QGKLYQSCNG 60 TSANSVEHIL SRYERSCTEA GERTNNGAGG QLEVLSQCTK FRTCRELLQT VDRLVEENNS 120 EELSVTDMTE LELELNAALV QTRLRKTQLM TEYMSTLQAE VCLYLISLHK KLSRVDQNHG 180 DTKSVDEMRY NETLVKYKTE LDVASAKQLQ KDGGCGGLND LASNQTNSAQ HLVTLPLFNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65050.1 | 1e-34 | MIKC_MADS family protein |