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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc029063.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 129aa MW: 14941.2 Da PI: 6.2532 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 37.4 | 3.2e-12 | 1 | 29 | 21 | 49 |
HHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 21 lKKAeELSvLCdaevaviifsstgklyey 49 +KKA LSvLCd+++av+ fs +gklye Cse_sc029063.1_g010.1 1 MKKARHLSVLCDVDIAVLAFSARGKLYES 29 8**************************95 PP | |||||||
2 | K-box | 15.9 | 5.5e-07 | 88 | 120 | 44 | 76 |
K-box 44 esLslkeLqqLeqqLekslkkiRskKnellleq 76 e+Ls+ ++ +Leq+L+ l + Rs+K +++++ Cse_sc029063.1_g010.1 88 EELSVTDMTELEQELDAVLVQTRSRKRWIIFTE 120 68************************9988765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MKKARHLSVL CDVDIAVLAF SARGKLYESC SGSTNSVDHI LSRFNEASLM QEREPTIELG 60 VLSQCTKFRT CKQLLHMVDR LVQENNNEEL SVTDMTELEQ ELDAVLVQTR SRKRWIIFTE 120 QLVYIRFVF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30260.1 | 6e-19 | MIKC_MADS family protein |