PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015031.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MIKC_MADS

Protein Properties

Length: 564aa MW: 62020.2 Da PI: 4.2842

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015031.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	39.6	6.9e-13	1	29	21	49
HHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 21 lKKAeELSvLCdaevaviifsstgklyey 49 +KKA LSvLCd+++av++fss+gklye Cse_sc015031.1_g010.1 1 MKKARQLSVLCDVDIAVVVFSSRGKLYES 29 8**************************95 PP
2	K-box	20	2.8e-08	470	535	23	89
K-box 23 kLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqe 89 + + +e Lq+ +l+ e+ e+Ls++++ qLe +L+ +l + R +K++ l e eelq++ ++++ Cse_sc015031.1_g010.1 470 RFRTCNELLQTV-DRLVEENNEQLSVNDMTQLELELDAALMQTRLRKEKTLSEDKEELQMQVVAAKQ 535 666778888877.668889999*************************************99877665 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MKKARQLSVL CDVDIAVVVF SSRGKLYESS SGSNSNNSAP SVANEAEPNY GFDPVVLEAC 60 KTFEEAMRGA EVKNAENVDN GTNVASNSSP KVHNQPLPTG VPSVKSVSYA GATSIDPTKR 120 KSNFRRLECS NKSNGVDLSI PMKVVEEFST RKGVDDVLEN GPWMIRNVPI ILKTWTLNTN 180 LLKEDLTNIP VWVKFHDVPL AMFSDDGLSL LATLIGTPKM LDSYTSQMCL ESWGRSSFAR 240 CLIEVTADQV LRESITVEIP LLDGTGSTIE KIQVEYEWKP PRTMEAKEIG SLKTGNVSQE 300 PLVSDSMEAN EVGPTPIVEK IGEFEKLLID GKATLVDDDG NPIKKVDYPG NNNEFPSTSS 360 TKRVNPFSKV GEIVDSDSDE EEIVNTFDES VNLFGGGHDH EDDYDDYADQ VYDLPGNLDA 420 YYDTYGIKLQ GLGRNVESIL ARYEKSCAEI GEGSNSGAGT DLEFLLQSTR FRTCNELLQT 480 VDRLVEENNE QLSVNDMTQL ELELDAALMQ TRLRKEKTLS EDKEELQMQV VAAKQNDGGG 540 GLKNLATNQE NSPQHLVTLP LFNG

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MKKARQLSVL CDVDIAVVVF SSRGKLYESS SGSNSNNSAP SVANEAEPNY GFDPVVLEAC  60
KTFEEAMRGA EVKNAENVDN GTNVASNSSP KVHNQPLPTG VPSVKSVSYA GATSIDPTKR  120
KSNFRRLECS NKSNGVDLSI PMKVVEEFST RKGVDDVLEN GPWMIRNVPI ILKTWTLNTN  180
LLKEDLTNIP VWVKFHDVPL AMFSDDGLSL LATLIGTPKM LDSYTSQMCL ESWGRSSFAR  240
CLIEVTADQV LRESITVEIP LLDGTGSTIE KIQVEYEWKP PRTMEAKEIG SLKTGNVSQE  300
PLVSDSMEAN EVGPTPIVEK IGEFEKLLID GKATLVDDDG NPIKKVDYPG NNNEFPSTSS  360
TKRVNPFSKV GEIVDSDSDE EEIVNTFDES VNLFGGGHDH EDDYDDYADQ VYDLPGNLDA  420
YYDTYGIKLQ GLGRNVESIL ARYEKSCAEI GEGSNSGAGT DLEFLLQSTR FRTCNELLQT  480
VDRLVEENNE QLSVNDMTQL ELELDAALMQ TRLRKEKTLS EDKEELQMQV VAAKQNDGGG  540
GLKNLATNQE NSPQHLVTLP LFNG