PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010656.1_g040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family AP2
Protein Properties Length: 524aa    MW: 58352.8 Da    PI: 7.1577
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010656.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-17134183155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Cse_sc010656.1_g040.1 134 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAARAYDRAAIKFRG 183
                            78*******************......55************************997 PP

2AP2409.7e-13226276155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                            s+y+GV+ +k  grW+A+       g    +k+++lg f+ + eAa+a+++a+ k +g
  Cse_sc010656.1_g040.1 226 SKYRGVTLHK-CGRWEAR---M---GqllGKKYVYLGLFDNEVEAARAYDKAAIKCNG 276
                            89********.7******...5...334336**********99**********99776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MLDLNIDIAQ PSVDDRIHET NNVVEDRLSG TSVSSDVLDN DPPVANADDV DSVTYVARNI  60
ENCPYRENEK NGLKTRQFFP VGCDLEVEDD EEEDELGSRS KIGSQWLNLK VPEVHVPQPA  120
VAKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY LGGFDTALAA ARAYDRAAIK  180
FRGIDADINF HINEYEEDMA QAKNLSKEEF IHILRRQSTG FSRGSSKYRG VTLHKCGRWE  240
ARMGQLLGKK YVYLGLFDNE VEAARAYDKA AIKCNGREAV TNFEPSIYGT DISLEAMDEG  300
TGGHNLDLNL SVSSVTNSPK RNHNVQNLDM CFTTSELPYE KRLKVQPHPP VSLHHPPTNV  360
HEQSAVSKHY PVSQVQHHPP ANVHGQSAVS KHYPVSQVQH HPSPNVHGQS AVSRHYPLWS  420
NISSTPNCEE IAIGKGSTNV LPSQGLSNSA WQVQVQMQMQ NQMLRSHGVA LPVPVSSYAA  480
SSGFSSSVPV FSNSPFQSSN KIYHNSSIRM PTGTSLYYTN NHTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.38e-94AP2 family protein