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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc010656.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | AP2 | ||||||||
Protein Properties | Length: 524aa MW: 58352.8 Da PI: 7.1577 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 134 | 183 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Cse_sc010656.1_g040.1 134 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAARAYDRAAIKFRG 183 78*******************......55************************997 PP | |||||||
2 | AP2 | 40 | 9.7e-13 | 226 | 276 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+ + eAa+a+++a+ k +g Cse_sc010656.1_g040.1 226 SKYRGVTLHK-CGRWEAR---M---GqllGKKYVYLGLFDNEVEAARAYDKAAIKCNG 276 89********.7******...5...334336**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 524 aa Download sequence |
MLDLNIDIAQ PSVDDRIHET NNVVEDRLSG TSVSSDVLDN DPPVANADDV DSVTYVARNI 60 ENCPYRENEK NGLKTRQFFP VGCDLEVEDD EEEDELGSRS KIGSQWLNLK VPEVHVPQPA 120 VAKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY LGGFDTALAA ARAYDRAAIK 180 FRGIDADINF HINEYEEDMA QAKNLSKEEF IHILRRQSTG FSRGSSKYRG VTLHKCGRWE 240 ARMGQLLGKK YVYLGLFDNE VEAARAYDKA AIKCNGREAV TNFEPSIYGT DISLEAMDEG 300 TGGHNLDLNL SVSSVTNSPK RNHNVQNLDM CFTTSELPYE KRLKVQPHPP VSLHHPPTNV 360 HEQSAVSKHY PVSQVQHHPP ANVHGQSAVS KHYPVSQVQH HPSPNVHGQS AVSRHYPLWS 420 NISSTPNCEE IAIGKGSTNV LPSQGLSNSA WQVQVQMQMQ NQMLRSHGVA LPVPVSSYAA 480 SSGFSSSVPV FSNSPFQSSN KIYHNSSIRM PTGTSLYYTN NHTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 8e-94 | AP2 family protein |