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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc009650.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | AP2 | ||||||||
Protein Properties | Length: 362aa MW: 41294.4 Da PI: 5.7726 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59 | 1.1e-18 | 40 | 91 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ +g+++AeIrd + ng r++lg+f+ aeeAa a+++a+ +l+g Cse_sc009650.1_g020.1 40 CSYRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDLAEEAALAYDQAAYALRG 91 67********.**********44465..*************************98 PP | |||||||
2 | AP2 | 58.9 | 1.3e-18 | 222 | 271 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + ng r++lg+f+taeeAa a+++a+ + +g Cse_sc009650.1_g020.1 222 YRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDTAEEAALAYDQAAYAVRG 271 9*******.**********44465..**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence |
MDTSFSSMEY SFTHHHFLPF NENDSEEMLL FGCLDKEKEC SYRGVRKRPW GKYAAEIRDS 60 TRNGVRVWLG TFDLAEEAAL AYDQAAYALR GSGAVLNFSE DLVYESLRKM DYKYEEGSSP 120 VLALKRTHSM KRKSMNTKAK KKKEKDAKVE NVVVLEDLGR DYLEELLGFS ESCSSSSSTS 180 TNQHVLPFNE NDSEEMLLFG VIADVHYVNQ EDCLEREKEF TYRGVRKRPW GKYAAEIRDS 240 TRNGVRVWLG TFDTAEEAAL AYDQAAYAVR GSGTVLNFSE EFVYESLVKM DYKYEEGGSP 300 VLALKRKHTI KRKSMAKKMK KKEDKVVKVE NVVVLEDLGR DYLEELLGLS ESCSSSSSSS 360 SW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-41 | ERF family protein |