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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc009571.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | AP2 | ||||||||
Protein Properties | Length: 279aa MW: 31259.4 Da PI: 7.661 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.9 | 4.5e-12 | 63 | 114 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + k +Wv+e+r+p + r++lg++ e+ a+a++ a ++++g Cse_sc009571.1_g030.1 63 PVYRGVRSRGKGRKWVCEVRHPI----TqSRVWLGTHPNDEMGARAHDVAVLAMRG 114 68********9999*******72....46*************************98 PP | |||||||
2 | AP2 | 22.4 | 3e-07 | 202 | 231 | 27 | 55 |
AP2 27 kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++ r++lg++ ae+Aa+a++ a ++++g Cse_sc009571.1_g030.1 202 ITqSRVWLGTHPNAEMAARAHDVAVLAMRG 231 3459************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MDMYASYESY NSFPSSSSST ETPLTCTDGS GSFSSELDQV VMLASENPKK RAGRKKFKET 60 RHPVYRGVRS RGKGRKWVCE VRHPITQSRV WLGTHPNDEM GARAHDVAVL AMRGPKYACL 120 NFADSVWRLP VPESNHVADI QKAAAEAAEV FRHTKPEVAM DYYMNEDELP GFSSELEVLM 180 LATENPKKRA GRKKFKETRH PITQSRVWLG THPNAEMAAR AHDVAVLAMR GPKHAYELPG 240 FLDSMAEALM LPPPQSFVGY GSNIFDDVES CADMSLWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 1e-50 | ERF family protein |