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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc005701.1_g040.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 231aa MW: 25950.7 Da PI: 5.8539 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 80.1 | 1.5e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i n + rqvtfskRr g+lKKAeEL vLCda+va++ifs tgkl+ey+s Cse_sc005701.1_g040.2 9 KKIVNITARQVTFSKRRRGLLKKAEELAVLCDADVALVIFSATGKLFEYAS 59 678999*******************************************86 PP | |||||||
2 | K-box | 43.8 | 1.1e-15 | 95 | 172 | 22 | 99 |
K-box 22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ ke+ + re+ +l GedL+ Lsl+eLq+Le+ Le +l ++ ++K+e + ++i lq+k +l eenk L+++++ Cse_sc005701.1_g040.2 95 TRMGKEVLEKNRELSQLRGEDLQGLSLEELQRLESMLEGGLHRVLETKDERIANEIASLQQKGFQLMEENKLLKQQMM 172 444444444458999************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MAREKIKIKK IVNITARQVT FSKRRRGLLK KAEELAVLCD ADVALVIFSA TGKLFEYASS 60 SMQELLGKYK LHATNNADKA NEPSLQLQLL ETDETRMGKE VLEKNRELSQ LRGEDLQGLS 120 LEELQRLESM LEGGLHRVLE TKDERIANEI ASLQQKGFQL MEENKLLKQQ MMTLISKGKR 180 PRTIATELDN LQVTIHEDQG QSSESVTTNV SGPPPEDDCS DTALKLALPF N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-81 | MIKC_MADS family protein |