![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc005308.1_g070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 248aa MW: 28520.3 Da PI: 9.0038 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.8 | 1.1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s Cse_sc005308.1_g070.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 100.1 | 3.2e-33 | 82 | 173 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 + e+++++ ++e+ +Lk+++e Lqr+qR+llGedL +L+ keL+qLe+qLe sl+kiRs+K++ +l+q+ elq+ke+ l e+nkaLrk Cse_sc005308.1_g070.1 82 QPENESQYNYHEYLRLKARVEVLQRSQRNLLGEDLAPLNTKELEQLEHQLEMSLRKIRSTKTQSMLDQLAELQRKEQVLAETNKALRK 169 678999********************************************************************************** PP K-box 97 klee 100 klee Cse_sc005308.1_g070.1 170 KLEE 173 *987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 248 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 SSMVKTLEKY HSCSYGSLKG SQPENESQYN YHEYLRLKAR VEVLQRSQRN LLGEDLAPLN 120 TKELEQLEHQ LEMSLRKIRS TKTQSMLDQL AELQRKEQVL AETNKALRKK LEESAQEFPR 180 QMWDGGAQTI PYNPLPTHSD EFFQPLGLNS TMHNSYNGLR YNPIGSDEMN VSGDNANNPN 240 GLFPGWML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G02310.1 | 3e-96 | MIKC_MADS family protein |