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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001511.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 195aa MW: 22720.2 Da PI: 5.4698 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 82.1 | 3.5e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+k+ rqvtfskRrng+lKKA+EL LCd++va+ +fs++gkl+e+s+ Cse_sc001511.1_g010.1 9 KRIEDKTSRQVTFSKRRNGLLKKAYELAELCDVDVALFVFSERGKLQEFST 59 79***********************************************96 PP | |||||||
2 | K-box | 21.9 | 7.2e-09 | 104 | 170 | 33 | 99 |
K-box 33 reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 qRhl +++++L++ L qL qqL++ l++++ +K+el + ++ lq +e +l++e k++ +++ Cse_sc001511.1_g010.1 104 MIQRHLEENNIKQLDITGLDQLVQQLNSFLEQVKIRKMELKMGVLKALQDQEMQLKKERKDMMDQIM 170 5689********************************************************9999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MGRGKVELKR IEDKTSRQVT FSKRRNGLLK KAYELAELCD VDVALFVFSE RGKLQEFSTG 60 ESMAEILTRY QSYKKTEELT RIIVHESVAP QYRDVFTADE LTEMIQRHLE ENNIKQLDIT 120 GLDQLVQQLN SFLEQVKIRK MELKMGVLKA LQDQEMQLKK ERKDMMDQIM AMDRINNDSD 180 AAEPQSPVMG VQITW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65050.2 | 1e-37 | MIKC_MADS family protein |