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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000289.1_g110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 254aa MW: 29188.9 Da PI: 8.8109 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.5 | 2.8e-31 | 35 | 84 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ Cse_sc000289.1_g110.1 35 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 84 79***********************************************8 PP | |||||||
2 | K-box | 114.5 | 1e-37 | 106 | 199 | 7 | 100 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 s++ea+a+ +qqe++kL+++i nLq+++R+++Ge+L++++ k+L++Le++Lek++++iRskKnell+++ie++qk+e+el++ n+ L Cse_sc000289.1_g110.1 106 GSVAEANAQFYQQEAQKLRQQIANLQNQNRNIMGESLGNMQAKDLRNLETKLEKGISRIRSKKNELLFAEIEYMQKRENELHNSNQFL 193 45899*********************************************************************************** PP K-box 95 rkklee 100 r+k++e Cse_sc000289.1_g110.1 194 RAKIAE 199 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
ETHYYQSGLL MSLPENDSGE ISPERKLGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE 60 LSVLCDAEVA LIVFSTRGRL YEYANNSVKG TIDRYKKACL DPPSSGSVAE ANAQFYQQEA 120 QKLRQQIANL QNQNRNIMGE SLGNMQAKDL RNLETKLEKG ISRIRSKKNE LLFAEIEYMQ 180 KRENELHNSN QFLRAKIAEN ERAQQQHMSL MPGSSDYDLV APHQPFDGRN YLQVNELQPN 240 NNYSCQDQTP LQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-121 | MIKC_MADS family protein |