PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62044764-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | TCP | ||||||||
Protein Properties | Length: 193aa MW: 21647 Da PI: 8.6656 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 114.2 | 1.7e-35 | 86 | 183 | 1 | 97 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksa 94 aagkkdrh ki T++g RdRRvRls+++a++fF Lqd+LGfdk+skt+ WLl+ +k+ai+el++ts+ ++ + ++++ ++ ++++ +++++++ AUR62044764-RA 86 AAGKKDRHTKITTAQGVRDRRVRLSMSIAREFFNLQDMLGFDKASKTLGWLLTHSKAAIDELASTSNLKPPVTpDDNEVVVINDQEYCTSNNNDD 180 699**************************************************************555443332222222222211111111111 PP TCP 95 aks 97 +ks AUR62044764-RA 181 EKS 183 111 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MFSSNNNNNS YPLFYDQSPS FFTNRAIPES NNIFLFQHYY GKFLPPTSYP PISDNSIVNL 60 SSEPSINQQN GLLCPSNVRV SSSRRAAGKK DRHTKITTAQ GVRDRRVRLS MSIAREFFNL 120 QDMLGFDKAS KTLGWLLTHS KAAIDELAST SNLKPPVTPD DNEVVVINDQ EYCTSNNNDD 180 EKSSSKRERG EK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67260.2 | 3e-28 | TCP family protein |