PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62044545-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 340aa MW: 37437.1 Da PI: 6.3025

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62044545-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27	8e-09	154	201	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ ++P + +k Ka +L + ++Y++sLq AUR62044545-RA 154 SHSLAERVRREKISERMKMLQAIVPGC----DKVTGKALMLDEIINYVQSLQ 201 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MAAFQQYPAS FLVDSVFMPA IKTPEIGAFD EFIAKSNQFY ASSEKSQDPF TIYSQEGSSI 60 DNEPSSVSEK QRTESLSMAD KGDSSDQMTQ SSVPVDKKRK SRKGSSSNSA NSKDVKQAKC 120 KKQKEDKEAM KDKSDEPPKG YIHVRARRGQ ATDSHSLAER VRREKISERM KMLQAIVPGC 180 DKVTGKALML DEIINYVQSL QSQVEFLSMK LASLDPMVYN FGLMDHDPMM FGTQAMTNGM 240 TLPMQPLMQP TSNGGSSIDQ PQAFATTNAV SCSTTSSAST PTFTSPVVDS STSLIQQQEQ 300 KPTLLPLQDA GSLYWGLNEQ QRQSIINQLG FTNNLYSFQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	124	KKRKSRKGSSSNSANSKDVKQAKCKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	6e-50	bHLH family protein