PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62044373-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 455aa MW: 51258.6 Da PI: 4.9836

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62044373-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.9	1.6e-52	25	152	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 l pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLpk ++a+ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ AUR62044373-RA 25 LLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKFDPWDLPKFASAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 118 579*************************.89***********8888899***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg+ktdW+mhe+rl AUR62044373-RA 119 eGNKCIGLKKSLVFYQGRAAKGVKTDWMMHEFRL 152 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MEETMIKDCS MNEKTNEGEK VDEVLLPGFR FHPTDEELVG FYLKRKIQQR PLSIELIKQL 60 DIYKFDPWDL PKFASAGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG 120 NKCIGLKKSL VFYQGRAAKG VKTDWMMHEF RLPSLGDATL TKRCVDKNLP VNDSWAICRI 180 FKKTGPITSR THTHSWVSPS PDPTHPKLTS RLHPSSSCNN PNFSPDNMIN TSCSSPMQQP 240 NSSNINELDQ FLESPNNYSS FLDQIPTFKP IYPTTSNYNA DETIISNDSN LFANIATLLD 300 FPPCYTLPQL EDPSDPSNKS NNIDISSMLL NMSSSVLGNF DKHSNGNVEF GMVPNINGPC 360 HDFSLVTLSQ EHMQLVNIED ERIHEYCGDD QQDFACTLLG NLNSMLYADD NGHQWDGIET 420 IGSIPISDLL PPLAMPETWK SPSSLIWDCA PPLS*

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MEETMIKDCS MNEKTNEGEK VDEVLLPGFR FHPTDEELVG FYLKRKIQQR PLSIELIKQL  60
DIYKFDPWDL PKFASAGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG  120
NKCIGLKKSL VFYQGRAAKG VKTDWMMHEF RLPSLGDATL TKRCVDKNLP VNDSWAICRI  180
FKKTGPITSR THTHSWVSPS PDPTHPKLTS RLHPSSSCNN PNFSPDNMIN TSCSSPMQQP  240
NSSNINELDQ FLESPNNYSS FLDQIPTFKP IYPTTSNYNA DETIISNDSN LFANIATLLD  300
FPPCYTLPQL EDPSDPSNKS NNIDISSMLL NMSSSVLGNF DKHSNGNVEF GMVPNINGPC  360
HDFSLVTLSQ EHMQLVNIED ERIHEYCGDD QQDFACTLLG NLNSMLYADD NGHQWDGIET  420
IGSIPISDLL PPLAMPETWK SPSSLIWDCA PPLS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-102	NAC family protein