PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62043582-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 223aa MW: 24949.8 Da PI: 6.5209 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.7 | 4.3e-13 | 160 | 205 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l+P+ +k + a++L +Av+YIk+Lq AUR62043582-RA 160 SIAERVRRTRISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKDLQ 205 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MTGYGMMGGM GSYGGSNVQV NYSSGQPSST SELVNQNSDV GAKRLRMNSL DETKFSNSSN 60 NPNDDSNYDF PMNSWDDSIL SENFSGLDRV ADEDIKVFPE LNASENQSGE IKNRPPPLTH 120 HLSLPKTLPE LSNMEKFLQF QDSTPLRIRA KRGCATHPRS IAERVRRTRI SERMRKLQDL 180 VPNMDKQTNT ADMLDLAVDY IKDLQKHVEN LADNRAKCTC SR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 1e-59 | bHLH family protein |