PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62043491-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 394aa MW: 43868.5 Da PI: 5.1509

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62043491-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.3	7e-54	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtd+elv++yLk+k+ gk++++ ++i+e+diyk+ePwdLp +k+k++++ewyfF +d+ky +g+r nrat +gyWkatg+d++++ AUR62043491-RA 16 LAPGFRFHPTDQELVSYYLKRKICGKPIRF-DAISETDIYKSEPWDLPalSKLKSRDNEWYFFGVQDRKYVNGSRVNRATGKGYWKATGNDRPIV 109 579************************9.99***********544999999************************************ PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + ++vg+kktLvfy+grap g++t+Wvmheyrl AUR62043491-RA 110 H-NFRTVGMKKTLVFYSGRAPCGKRTNWVMHEYRL 143 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MLLPPPSPTP ATATSLAPGF RFHPTDQELV SYYLKRKICG KPIRFDAISE TDIYKSEPWD 60 LPALSKLKSR DNEWYFFGVQ DRKYVNGSRV NRATGKGYWK ATGNDRPIVH NFRTVGMKKT 120 LVFYSGRAPC GKRTNWVMHE YRLTDEELAK SGIVMDSYLL CKILKKSGPG FKPGEQYGPF 180 VEEEWEKDES TVVPGEEGDD EAAGNDDARV EDSIPSINNS ESAPVTSCGL STEVQEIPPL 240 CKVERAEEGP VPCTVDPEPL SLGPNKRLRR SEPDTCHSNA SEISTTITQG PCSSSTGTTN 300 FSSGLLDFPL LESMEPKERP SPPPANVIDI NVPPSYLKLF EELRNEIYRT SIEKESLKIE 360 VMSARTMINI LQTKVDHLTK ENEDLKKSSL RDG*

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MLLPPPSPTP ATATSLAPGF RFHPTDQELV SYYLKRKICG KPIRFDAISE TDIYKSEPWD  60
LPALSKLKSR DNEWYFFGVQ DRKYVNGSRV NRATGKGYWK ATGNDRPIVH NFRTVGMKKT  120
LVFYSGRAPC GKRTNWVMHE YRLTDEELAK SGIVMDSYLL CKILKKSGPG FKPGEQYGPF  180
VEEEWEKDES TVVPGEEGDD EAAGNDDARV EDSIPSINNS ESAPVTSCGL STEVQEIPPL  240
CKVERAEEGP VPCTVDPEPL SLGPNKRLRR SEPDTCHSNA SEISTTITQG PCSSSTGTTN  300
FSSGLLDFPL LESMEPKERP SPPPANVIDI NVPPSYLKLF EELRNEIYRT SIEKESLKIE  360
VMSARTMINI LQTKVDHLTK ENEDLKKSSL RDG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	9e-93	NAC family protein