PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62043211-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 139aa MW: 15548 Da PI: 11.0671 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.8 | 8e-08 | 42 | 83 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r RR+ri ++ L++l+P +K++ a++L +A++Y+k L AUR62043211-RA 42 AARHRRERISERVRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 83 5699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MAAMREMIFR IAAMQPIYID PESVKLPKRR NVRISKDPQS VAARHRRERI SERVRILQRL 60 VPGGTKMDTA SMLDEAIHYV KFLKNQVQSL ERAAVNNHRP IPASTGLGFP VAVASGGNGY 120 HQVHMNVATH NVQHYLDA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50330.1 | 1e-46 | bHLH family protein |