PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62041986-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 222aa MW: 24248 Da PI: 7.275 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 113.1 | 3.8e-35 | 68 | 148 | 4 | 82 |
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa..sec.eaesssssa 82 k ++++++hTkv+gR+RRvR++ +caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt++ +a + ++++sss++ AUR62041986-RA 68 KHSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTIEWLLRQAEPSIIAATGTGTVPAvaD-FsSPAKSSSTN 148 6789**********************************************************88888331.12222222222 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 222 aa Download sequence |
MSSETTILHN LQNSDQPQFT SQESQQQQSL PLSFSLPFPP MSITSCSSKS TTNNTSTTAA 60 KLAVTRRKHS STKDRHTKVN GRGRRVRMPP LCAARIFQLT RELGHRTDGQ TIEWLLRQAE 120 PSIIAATGTG TVPAVADFSS PAKSSSTNAI AALPLSMDNG WHFPSQTVGL EFGYRHIPSF 180 TALLLQPDDG EMKMRYQHEA HEAQEQGEGE GEGIAKQEVE N* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G37000.1 | 9e-30 | TCP family protein |