PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041828-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 299aa    MW: 33595 Da    PI: 6.3715
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041828-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.66.8e-3074132259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp+++++tY+ eHnh+
  AUR62041828-RA  74 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRSDPNTLVVTYSYEHNHP 132
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MEASLSELYS NMNYHMEDRE ISSDNSGDNS PPSTTFNASI SSPKRRRAIQ KKVMTFPLKE  60
IEGSRFKGDC TPPSDSWAWR KYGQKPIKGS PYPRGYYRCS SSKGCPARKQ VERSRSDPNT  120
LVVTYSYEHN HPWPISRNHH QNRHNNAAAT ATTTTSSTPT PENISTNTTM MSPTTSLNNP  180
STSTNKSSLQ PKIENHANDT IFQQNIDHHE IHHDPLLPPT DELSWFTSDH QILENNEFFS  240
NFNDLDMSKI FPMREEDESL FADLGELPEY SVVFRKAAGV AAVEECNLAP TTWCGTTG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.11e-52WRKY family protein