PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62041687-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 283aa MW: 30680.7 Da PI: 8.3277

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62041687-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.6e-12	93	135	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L AUR62041687-RA 93 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 135 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
LGGNSGLNSG EISGGDNNND KKRKFGNLGV LDSVSLDGSA FNYDSDDFTE NNNFKIGGDD 60 GGKNGGTNSN NTSTLTGGDS KGKKKGLPAK NLMAERRRRK KLNDRLYMLR SVVPKISKMD 120 RASILGDAIE YLKELLQKIN DLHNELESTP SSLPLPTNFH PLTPTLPNLP SRIKEELCPS 180 SLPSPNGQPA RIEVRLREGR AVNIHMFCGR RPGLLLSTMK TLDGLGLDIQ QAVISCFNGF 240 AMDIFRAEQC KDGQDLHPDQ IKAMLLDLTT FHDSTVVGNG NV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	83	101	KKKGLPAKNLMAERRRRKK
2	95	102	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-108	bHLH family protein