PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041525-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 551aa    MW: 61100.2 Da    PI: 4.3652
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041525-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.81e-53101371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     l+pGfrFhPtdeelv++yL++kv+gk++++ ++i+e+diykveP+dLp  +k+k+++ ewyfFs  d+ky +g r+nrat++gyWk+tgkd++v+
  AUR62041525-RA  10 LAPGFRFHPTDEELVWYYLRRKVSGKPFRV-DAISEIDIYKVEPSDLPglSKLKSRDLEWYFFSALDRKYGNGLRTNRATNEGYWKTTGKDRPVY 103
                     579***************************.99***************6448888888************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + k+++vg+kktLv++kgrap+ge+t+Wvmhey+l
  AUR62041525-RA 104 H-KSRVVGMKKTLVYHKGRAPRGERTNWVMHEYKL 137
                     *.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    
GRNSSASTSL APGFRFHPTD EELVWYYLRR KVSGKPFRVD AISEIDIYKV EPSDLPGLSK  60
LKSRDLEWYF FSALDRKYGN GLRTNRATNE GYWKTTGKDR PVYHKSRVVG MKKTLVYHKG  120
RAPRGERTNW VMHEYKLNDD VLEKAGHMPE GFVLCRVFQK SGTGPKNGEK YGAPLVEEEW  180
EDDSLEDVVP AEVSFEDPYV DDDAYIEQND LEQCQVVDCQ LPANVPFPVS FNPVDSNYYL  240
ECSQNVTGAE QASVVEESEG KCGLQVLDDQ EFYDLGQDEN TAFLVKNEHM AQPNDLSNQA  300
PGDLLDDLLS GNAPPKDGLF LDAVDFLEPV QEDIHDFDVL GSYLEDDFDI GPYLIFDSSP  360
EQIGIDADQS FSFKQNMMDT TWQVPSGSQL NETGDVDDVA SSSKAKPSKT DIQYPFLSQA  420
NRFLGNIPAP PAFASELPSK DVAARLSAAV QASTTPNVTA GMIRIRDLPI GVIRSGLAGL  480
HWSFDKTGNV NVLLSFDLPE AVNPVGLESL TGLLSRKIST ASSHGWLSFM FFLFFAFAAS  540
VKVGLYIYAK *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-120NAC family protein