PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041153-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 395aa    MW: 41988.2 Da    PI: 5.2256
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041153-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.95.4e-062833211154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  AUR62041153-RA 283 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 321
                     5778999**********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MAEEYCGGVN WWDSTTSTNR SRFDGGSGGG GGSSSTSSTT TLANSGGGAG YGWLTEGPTA  60
VDTKLDASSL QLVGLGLSSQ AMAEWNQQQT TILNPEKAEN SFRSMLQEGM GLTANFQQDT  120
SGGGGGGGVM FGGSNSPQLH QWRPDKLFPS SEDSSTDFKQ IGRGFSLDNQ PQFSPNGSSI  180
ESTVTCQGLT APSSFQLDNT SSSSSVFGSP SSILQAPLTD VRPNFFSSLQ GAQLPTMPTF  240
EEKPKTTMEV RDTSSMAKKN GSENNNKRAR NDGASSTLPP FKVRKEKMGD RITALQQLVS  300
PFGKTDTASV LSEAIEYIKF LHEQVSVLSN PYLKSGGSYQ QHQPGNEKAK IDPDGPKQDL  360
RSRGLCLVPV SSTFPVTHET TVDFWTPTFG GTFR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.18e-65bHLH family protein