PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62040948-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 204aa MW: 23143.6 Da PI: 10.226 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.3 | 8.7e-06 | 93 | 129 | 11 | 52 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 +R +++ ++++ L+el+ + +K + a++L++A+ YIk AUR62040948-RA 93 KRSQKLSEKISALQELVSPY-----GKTDTASVLQEACIYIK 129 7999**************99.....9***************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MPTPIENLSL ATPHLLDYRW NLPCDDSIKN DILLNQPYKP TIKDVRKSVT GAKLAQRNSV 60 LGNKASLEAS RANKKRKVIE QFVDTRKYKA PVKRSQKLSE KISALQELVS PYGKTDTASV 120 LQEACIYIKI IHQEIRRLSI SYFELRSALQ AQFQGDAERQ SDLQSKGLCL VPVSTMKSIT 180 RESWVVDHQT ASRTFKRSTY EFN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20640.1 | 2e-22 | bHLH family protein |