PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62040457-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TCP

Protein Properties

Length: 185aa MW: 19933.5 Da PI: 10.788

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62040457-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.4	1.3e-34	68	137	4	71
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa..s 71 k ++++++hTkv+gR+RRvR++ +caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt++ +a AUR62040457-RA 68 KNSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTIEWLLRQAEPSIIAATGTGTVPAvaD 137 7789**********************************************************77777321 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MGSETTILQT LQNSDQPQFT SQESQQQQSL PLSFSLPFPP MSITSCSSKS TTNNTSTTAA 60 KLAVTRRKNS STKDRHTKVN GRGRRVRMPP LCAARIFQLT RELGHRTDGQ TIEWLLRQAE 120 PSIIAATGTG TVPAVADFTS PAKSSSTPAI AALPLSMDNG WHFPSQTVGL EFGYRHIPSF 180 TALG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	3e-29	TCP family protein