PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62040120-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 391aa MW: 43352.2 Da PI: 9.4556

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62040120-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.4	3e-49	3	127	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eelv +yL++kvegkk+++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + ++ AUR62040120-RA 3 MPGFRFHPTEEELVEFYLRHKVEGKKFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRGEN 96 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyr 127 ++ +glkktLvfy+g+apkg +t+W+m+eyr AUR62040120-RA 97 SRPIGLKKTLVFYSGKAPKGIRTSWIMNEYR 127 ****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MVMPGFRFHP TEEELVEFYL RHKVEGKKFN VELITFLDLY RYDPWELPAL AAIGEKEWFF 60 YVPRDRKYRN GDRPNRVTTS GYWKATGADR MIRGENSRPI GLKKTLVFYS GKAPKGIRTS 120 WIMNEYRHPQ HETERYQKAE ISLCRVYKRP GVEDHPSVPR GSSLPSRLSS SSKATSLSSE 180 RKNYHNAFRA QTTCVQQQLE HPPPQMGDKV SDTDASSSTE VGTALGLSHH SSYTALLNDH 240 NQNLKHHNHQ VVVGGGGGGH GVITSLPSSL NNSITHQHPT PGLVPPNHHH QPTLNNDNNP 300 SSSNSTTNNL PFLFSNYFFS PAAAQQAQAT LINNNPPTAA VGGGSSSSSL QLPPVTVAGA 360 GAGLAFSDRS LWDWNPYSEP NRDHFSNLFK *

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MVMPGFRFHP TEEELVEFYL RHKVEGKKFN VELITFLDLY RYDPWELPAL AAIGEKEWFF  60
YVPRDRKYRN GDRPNRVTTS GYWKATGADR MIRGENSRPI GLKKTLVFYS GKAPKGIRTS  120
WIMNEYRHPQ HETERYQKAE ISLCRVYKRP GVEDHPSVPR GSSLPSRLSS SSKATSLSSE  180
RKNYHNAFRA QTTCVQQQLE HPPPQMGDKV SDTDASSSTE VGTALGLSHH SSYTALLNDH  240
NQNLKHHNHQ VVVGGGGGGH GVITSLPSSL NNSITHQHPT PGLVPPNHHH QPTLNNDNNP  300
SSSNSTTNNL PFLFSNYFFS PAAAQQAQAT LINNNPPTAA VGGGSSSSSL QLPPVTVAGA  360
GAGLAFSDRS LWDWNPYSEP NRDHFSNLFK *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-107	NAC family protein