PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62039941-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 277aa MW: 30852.3 Da PI: 9.8428

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62039941-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.2e-30	208	265	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++prsYY+C++ gCp++k+ver+ +d +++++tYegeH h+ AUR62039941-RA 208 DEYCWRKYGQKPIKGSPHPRSYYKCSTCkGCPARKQVERCLQDSSMLIVTYEGEHVHS 265 9**********************9877**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MQGASNACDL STAICSISDL QVNEAAQTGL RYAHQYISSI SDQNNLLNSS MIKQSSLIAN 60 EAIKEFKKLL YLLEDSTSTK TKPSRRVKQG PLPKNMGINP KDMVGLSIEN SYKLASSTRV 120 PNKEFNVINI NRSYSNPVLC MEGSTTSSSR QIVMQNSMSG ILSFSEDATT KCASSSKTCH 180 CSKKRKRREK RKVRVPAISD KIADIPPDEY CWRKYGQKPI KGSPHPRSYY KCSTCKGCPA 240 RKQVERCLQD SSMLIVTYEG EHVHSKFTFP YSTITF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	188	KKRKRR
2	183	191	KKRKRREKR
3	185	190	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28650.1	9e-45	WRKY family protein