PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62039927-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 371aa MW: 42952.2 Da PI: 6.7147

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62039927-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.1	4.7e-55	7	135	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL++kv+++k+ ++ik+vd+yk+ePwdL++ k+++ e++ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk++ AUR62039927-RA 7 VPPGFRFHPTDEELVDYYLREKVAARKMC--DIIKDVDLYKIEPWDLQElcKISNeEQHEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI 99 69*********************9954..58**********954555542555******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k++l+g++ktLvfykgrap+g+k+dW+mheyrle AUR62039927-RA 100 YS-KHNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 135 .899*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MNTLSHVPPG FRFHPTDEEL VDYYLREKVA ARKMCDIIKD VDLYKIEPWD LQELCKISNE 60 EQHEWYFFSH KDKKYPTGTR TNRATKAGFW KATGRDKAIY SKHNLIGMRK TLVFYKGRAP 120 NGQKSDWIMH EYRLETNENG TPQEEGWVVC RVFKKRMATV RKLDDSPCWY DDQLSFMPDM 180 DSPRRIPQHP NNYHTPNFHQ RHHNMYPCKQ ELEIAPYNIS HHDPFLQLPQ LESPKMPQPS 240 MQTCNSMPPY GTSTNLSSSL LVQDQMIHSQ QFDSMYGNVC GSEQVLEDQV TDWRVLDKFV 300 ASQLSQDEQH GPSAANKEIN YSNVPIFPVS EHMNMVISPN NSNKQGQLGA SSSDQYASTS 360 NSSCQIDMWN *

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MNTLSHVPPG FRFHPTDEEL VDYYLREKVA ARKMCDIIKD VDLYKIEPWD LQELCKISNE  60
EQHEWYFFSH KDKKYPTGTR TNRATKAGFW KATGRDKAIY SKHNLIGMRK TLVFYKGRAP  120
NGQKSDWIMH EYRLETNENG TPQEEGWVVC RVFKKRMATV RKLDDSPCWY DDQLSFMPDM  180
DSPRRIPQHP NNYHTPNFHQ RHHNMYPCKQ ELEIAPYNIS HHDPFLQLPQ LESPKMPQPS  240
MQTCNSMPPY GTSTNLSSSL LVQDQMIHSQ QFDSMYGNVC GSEQVLEDQV TDWRVLDKFV  300
ASQLSQDEQH GPSAANKEIN YSNVPIFPVS EHMNMVISPN NSNKQGQLGA SSSDQYASTS  360
NSSCQIDMWN *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-146	NAC family protein