PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039903-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 314aa    MW: 34905.9 Da    PI: 4.5269
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039903-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.71.5e-06182233255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+  +e+E rRR  i ++ + L +llP  +  ++k+ +  +++  ++ +Ik+Lq
  AUR62039903-RA 182 RERSKEAETRRRLIISQRVQDLHDLLPATF--KDKRGNQESVVNDVIGHIKYLQ 233
                     666799**********************64..9999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MVCSEQVPFS GADFYNGNLL PFPPADQTSA MMDSQFWYRD TILAANGFSQ VPMNTIYNAT  60
DVTHSDALAG LTHIPLSTDP FIDHSEAQNY DISALRSSIP FYGPQESSGH GGLDNFVLNQ  120
WMPKEEPISY MDMEWQQVES PVFPVQAGNV NDTHEFLSNV KVEADTSDVA PVTLRSVSRT  180
NRERSKEAET RRRLIISQRV QDLHDLLPAT FKDKRGNQES VVNDVIGHIK YLQLQLKELS  240
RSRLGGDSSS GPLKFDEGYG HYQSHEQMFG ESLEEILGSL LEENPVAAHN LFESKGLCMV  300
PMASTDALLC NIK*