PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62039815-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 386aa MW: 43123.8 Da PI: 8.135

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62039815-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.6	2.1e-52	15	141	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPtdeelv +yLk+k+ +++l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++s+ AUR62039815-RA 15 LPGFRFHPTDEELVAFYLKRKILQQSLPI-ELIKQVDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSSRPNRVTCAGFWKATGTDRPIYSSd 108 69*************************.89***********9888999***********************************95 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +glkk+Lvfy+gra kg ktdW+mhe+rl AUR62039815-RA 109 GAKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRL 141 5566*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEEKHEVDKV DDVILPGFRF HPTDEELVAF YLKRKILQQS LPIELIKQVD IYKYDPWDLP 60 KLASTGEKEW YFYCPRDRKY RNSSRPNRVT CAGFWKATGT DRPIYSSDGA KCIGLKKSLV 120 FYRGRAAKGM KTDWMMHEFR LPSLHDSAPP KKLFDRSFPA NDAWAICRIF KKTNTMAQRA 180 ITHSWVSPLT ETTAACDMFN QASNLIGSHF SPDNISCTTE GANSSIQACN NSNLQNTTSS 240 PVSFSTLDQY KPITNPMVSK VSVIPTSFAD LPNNLIFPSG EVSAMFLNLT PAFTSEVGKI 300 TDIIDFGGSQ QLFNGLPMGL SQNIVEAEDQ LGFRKSQNQQ WNGIRSIGFP FSLPSSVSNS 360 GTLSWDSAPC PSELSTSYSS NKCYR*

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEEKHEVDKV DDVILPGFRF HPTDEELVAF YLKRKILQQS LPIELIKQVD IYKYDPWDLP  60
KLASTGEKEW YFYCPRDRKY RNSSRPNRVT CAGFWKATGT DRPIYSSDGA KCIGLKKSLV  120
FYRGRAAKGM KTDWMMHEFR LPSLHDSAPP KKLFDRSFPA NDAWAICRIF KKTNTMAQRA  180
ITHSWVSPLT ETTAACDMFN QASNLIGSHF SPDNISCTTE GANSSIQACN NSNLQNTTSS  240
PVSFSTLDQY KPITNPMVSK VSVIPTSFAD LPNNLIFPSG EVSAMFLNLT PAFTSEVGKI  300
TDIIDFGGSQ QLFNGLPMGL SQNIVEAEDQ LGFRKSQNQQ WNGIRSIGFP FSLPSSVSNS  360
GTLSWDSAPC PSELSTSYSS NKCYR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	1e-105	NAC family protein