PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62039664-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 567aa MW: 61727 Da PI: 6.9215

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62039664-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.00039	254	271	2	19
HHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsa 19 r +h++ E+rRR +iN++ AUR62039664-RA 254 RSKHSATEQRRRCKINDR 271 889*************96 PP
2	HLH	32.6	1.4e-10	274	315	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r RR+ + +f+ Lrel+P++ ++K +Ka+ L +++eYI++Lq AUR62039664-RA 274 RCRRNTVMARFHMLRELIPHS----DQKRDKASFLLEVIEYIQYLQ 315 89****************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MCNSDFVSGI ELQICRTLNL VEEELTEAAV FEERERAGGL LKTHNFLQPL EGEEKTGPKE 60 DNLVDINAKP PSAAPPTSVV EHVLPGGIGT YSISHISYFN PKVPKPEENI FSVAPATSND 120 KNDDNSNCSS YTGSGFTLWD ETTVKKGNTG KENLGDENIV KESTIKMGQW PLDRPSHSSS 180 NHRSSVSPLS SSQAIIQKSQ SFMEMIKSAK GPHSVVEEVE EDVSLKKESS SSLKGELRVN 240 VGGKSSDQKA ITPRSKHSAT EQRRRCKIND RQVRCRRNTV MARFHMLREL IPHSDQKRDK 300 ASFLLEVIEY IQYLQEKVNR YEGAYPGWNS EPPKLNPWRN SHGATEGFVD QSRAVNASPV 360 LMFGAKVDEK ATPSVSLNVP RNPQTPAECS MINAINVKTV DPQPGTTNKA GSISPPLQHD 420 IHAPIINSCA VAPPPVRLPS EAGNGSFPQL QLWQSRTSAA EPSLATDKLK DQELALEGGT 480 INISSVYSQG LLSTLTRALQ SSGVDLSQAS ISVQVDIGKR AHNRQDSQEV VGKVVETASG 540 NQSLQHARLD STSSESDHAV KRLKTG*

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MCNSDFVSGI ELQICRTLNL VEEELTEAAV FEERERAGGL LKTHNFLQPL EGEEKTGPKE  60
DNLVDINAKP PSAAPPTSVV EHVLPGGIGT YSISHISYFN PKVPKPEENI FSVAPATSND  120
KNDDNSNCSS YTGSGFTLWD ETTVKKGNTG KENLGDENIV KESTIKMGQW PLDRPSHSSS  180
NHRSSVSPLS SSQAIIQKSQ SFMEMIKSAK GPHSVVEEVE EDVSLKKESS SSLKGELRVN  240
VGGKSSDQKA ITPRSKHSAT EQRRRCKIND RQVRCRRNTV MARFHMLREL IPHSDQKRDK  300
ASFLLEVIEY IQYLQEKVNR YEGAYPGWNS EPPKLNPWRN SHGATEGFVD QSRAVNASPV  360
LMFGAKVDEK ATPSVSLNVP RNPQTPAECS MINAINVKTV DPQPGTTNKA GSISPPLQHD  420
IHAPIINSCA VAPPPVRLPS EAGNGSFPQL QLWQSRTSAA EPSLATDKLK DQELALEGGT  480
INISSVYSQG LLSTLTRALQ SSGVDLSQAS ISVQVDIGKR AHNRQDSQEV VGKVVETASG  540
NQSLQHARLD STSSESDHAV KRLKTG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.6	2e-73	bHLH family protein