PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62039063-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 245aa MW: 26234.6 Da PI: 8.487 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.6 | 0.00053 | 127 | 163 | 13 | 54 |
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R+++ ++++ L++l+ + +K + +++L +A+ YI+ L AUR62039063-RA 127 REKLGERIAVLQQLVSPY-----GKTDTSSVLHEAMGYIRFL 163 889999*********999.....9****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGENGGKEGE IHLPGGSFSR LLLSLEDVEE KGFSVDSPVS PTLFSSNTPN MLCFGDFISK 60 TTPKFTHTTA NTTNLTPSNS NKRRNGPGKE SENGSQNGQN QKNGVKKNKT EMGPIVTSSP 120 KHVKGKREKL GERIAVLQQL VSPYGKTDTS SVLHEAMGYI RFLHDQVKVL STPYLKLSPS 180 SSSPRHFISE KGGPSAMEMD SMEGLSSRGL CLVPLECILH VANNNGADFW SSATITSPGP 240 GLEI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19500.1 | 3e-31 | bHLH family protein |