PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62039039-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 471aa MW: 53451.1 Da PI: 8.5849

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62039039-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.4	1.1e-12	357	442	1	89
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f v+ ps+v ++ l++p + +++h ++ +++ ++l+ + + W k+ y++k++ l +GWk+F+ +n L+e D+++Fkl + ++ AUR62039039-RA 357 FTVVMRPSSVYRRFYLSIPAEWMNKHlALQ-NQD--IVLRV-EDNIWHTKFYYNGKRCVGGLCGGWKKFAFENSLEEFDVLLFKLANPKD 442 77899*******************6444.455..55444.4499*999999999999*******************975533 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MACGHVDIQT TDNVLLVGNE WKDFVKTYEL RENCLLMFKY KRNSSFEVLI FDQESFCEEE 60 ASYFIKKCSH PKPVHENHKK RIVREGSNTN VIGDNIDDDS AYVVSKKSKN NVDGEVNCLG 120 RENTQNPRNQ TSNLVIKKNG RGRPRKIKEP CNSWSKSKAQ SKEKPGINEA THEVSQVSLR 180 DLNTPENGES SPEKDHSNKL KDQIDKNPSG SDTAQKPGTN SGRDWSTPED REGSLEMNNH 240 HKSKTLSGKE PSENGTAEKI SQVLGSKPIV LNFEECSPTA DDSHSHRRKR GRPKKQAVPM 300 SSMKQVSRSG LTCFLCPEIV SSEKGYPEYV SNRRAVTEME KEDALRRATQ ERTEKSFTVV 360 MRPSSVYRRF YLSIPAEWMN KHLALQNQDI VLRVEDNIWH TKFYYNGKRC VGGLCGGWKK 420 FAFENSLEEF DVLLFKLANP KDDATVFDVE IFRVIPKILP PLQVNSSILT *

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MACGHVDIQT TDNVLLVGNE WKDFVKTYEL RENCLLMFKY KRNSSFEVLI FDQESFCEEE  60
ASYFIKKCSH PKPVHENHKK RIVREGSNTN VIGDNIDDDS AYVVSKKSKN NVDGEVNCLG  120
RENTQNPRNQ TSNLVIKKNG RGRPRKIKEP CNSWSKSKAQ SKEKPGINEA THEVSQVSLR  180
DLNTPENGES SPEKDHSNKL KDQIDKNPSG SDTAQKPGTN SGRDWSTPED REGSLEMNNH  240
HKSKTLSGKE PSENGTAEKI SQVLGSKPIV LNFEECSPTA DDSHSHRRKR GRPKKQAVPM  300
SSMKQVSRSG LTCFLCPEIV SSEKGYPEYV SNRRAVTEME KEDALRRATQ ERTEKSFTVV  360
MRPSSVYRRF YLSIPAEWMN KHLALQNQDI VLRVEDNIWH TKFYYNGKRC VGGLCGGWKK  420
FAFENSLEEF DVLLFKLANP KDDATVFDVE IFRVIPKILP PLQVNSSILT *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	8e-17	B3 family protein