PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62038863-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 590aa MW: 64482.2 Da PI: 6.5147

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62038863-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.9	1.2e-29	239	298	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+ +d +++++tYeg+Hnh+ AUR62038863-RA 239 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCCDDMSILITTYEGTHNHP 298 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MDANNRDTST SSAETNPEKD VIIVRHEDNC IEEMKPRIED EDKTLKISSP KQEIPVINKE 60 HNELESAKAE MGEVKEENER LKKMLERVEN DYKSLQWRFF DILQHEQSPS TISENTNQHK 120 DEPEVSLCLG LQVNNKRKKD DTNISRSSSI AKEDAKLMSE GLSLGLEYKS SPSINLSEKG 180 SERSTEMDDS KEDGTGETWP PSKVLKTTTD SAKEEETTQP NITKRARVSV RARCDTPTMN 240 DGCQWRKYGQ KIAKGNPCPR AYYRCTVAPS CPVRKQVQRC CDDMSILITT YEGTHNHPLP 300 VAATAMASTT SAAASILLSG SSTSQGGLTS SAPSMTSANL NGLSYTLYNN SRTGQFNLPN 360 SSAPTPPTIT LDLTATPSSV FNKSHTANNF LQTPSNYSSR SLDFSSSDTK STLFPVSWSN 420 NSYLNYSLLP SNKPPVGSIS FGKSTYEPVS HLNSLDRVNN QASTSSSSSS HQFLTETLTK 480 VLTSDPSFQS AVAAAISSMV GSSNNNITNN INRTNNAECL TTQSMRWADQ VQGNTANFLP 540 QNGKGCAPTY LNKPTSSASN SQSSGNFMLL QPPFPFSLSK SSSPQDHKD*

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MDANNRDTST SSAETNPEKD VIIVRHEDNC IEEMKPRIED EDKTLKISSP KQEIPVINKE  60
HNELESAKAE MGEVKEENER LKKMLERVEN DYKSLQWRFF DILQHEQSPS TISENTNQHK  120
DEPEVSLCLG LQVNNKRKKD DTNISRSSSI AKEDAKLMSE GLSLGLEYKS SPSINLSEKG  180
SERSTEMDDS KEDGTGETWP PSKVLKTTTD SAKEEETTQP NITKRARVSV RARCDTPTMN  240
DGCQWRKYGQ KIAKGNPCPR AYYRCTVAPS CPVRKQVQRC CDDMSILITT YEGTHNHPLP  300
VAATAMASTT SAAASILLSG SSTSQGGLTS SAPSMTSANL NGLSYTLYNN SRTGQFNLPN  360
SSAPTPPTIT LDLTATPSSV FNKSHTANNF LQTPSNYSSR SLDFSSSDTK STLFPVSWSN  420
NSYLNYSLLP SNKPPVGSIS FGKSTYEPVS HLNSLDRVNN QASTSSSSSS HQFLTETLTK  480
VLTSDPSFQS AVAAAISSMV GSSNNNITNN INRTNNAECL TTQSMRWADQ VQGNTANFLP  540
QNGKGCAPTY LNKPTSSASN SQSSGNFMLL QPPFPFSLSK SSSPQDHKD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-88	WRKY family protein