PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038798-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 347aa    MW: 38916.6 Da    PI: 4.9426
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038798-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.5e-102703101055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR riN+++  L+ l+P+      +K++ +++Le+A +YIk Lq
  AUR62038798-RA 270 RKRRMRINERLRILQNLVPNG-----TKVDISTMLEEAFHYIKFLQ 310
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MGMFLDGEWE SICKLFTVDE FPDLAADFLD YFSPESKHDN DSLAYAVLSS NPHAEKKAFP  60
HVDMNSLSSL CGWISKPPHN FLERKSHTNN SAHCVDDLRV STDILSCIDF SMVNGEIDAS  120
LGLLFPNDTL TDTSTFDNVV NINTFVDMSS PNTELTLKRK REVPMAPDDD KDERSSLMET  180
PKKNARISKT TQKAMRKTTQ KTDEHATPTV YTKENNEIAN SNAFDSNPCL SEEINETEDS  240
TSNITESTTS TGKKRASRGA ATDPQSLYAR KRRMRINERL RILQNLVPNG TKVDISTMLE  300
EAFHYIKFLQ LQIRLLSSDD LWMYAPLAYN GLDVGAYGRM PPFLGL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253273KKRASRGAATDPQSLYARKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.13e-50bHLH family protein