PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038707-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 350aa    MW: 38879.9 Da    PI: 4.529
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038707-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-102753151055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  AUR62038707-RA 275 RKRRERINERLRILQSLVPNG-----TKVDISTMLEEAVHYVKFLQ 315
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MMMEAEWGSF NGISVNDEAD FMAQLFPNCS LEQELESCSL ALSSSCYSGM TEDDRLDSSS  60
FFSTDDKNFN SYCLSQGSNY SGGSSSITVV YPYHENFCLS ETHQIFAAND NSCHFPVDLC  120
PSAAKNFIQR FPGNSMERSD SLNLEISCGG SFEDQPELSE NKHLQLKQEY EMSEVEPASE  180
DRSSGLFESG KKRSRISEKG KRSVRTKRNQ KSGSDDEDNA PDFTKQNSST SSEELEECNG  240
SQELGSKETA AAVKMNGKTR ASRGAATDPQ SLYARKRRER INERLRILQS LVPNGTKVDI  300
STMLEEAVHY VKFLQLQIKL LSSDEMWMYA PLAYNGVDFG LDSKISALL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.11e-45bHLH family protein