PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62038082-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 28449.7 Da PI: 8.0534 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.8 | 5.9e-11 | 192 | 237 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri ++ +L+el+P+ +k s +++L +Av++Ik Lq AUR62038082-RA 192 SIAERERRTRISGKLKKLQELVPNM----DKQTSYSDMLDLAVQHIKGLQ 237 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDSTSKTTSS SNLIRHSSSP AGFLSHLASD IGYSVPKGFD VNYNNGLAGN SSIGHDQHML 60 SRLGSQLSFT RKDHHSLSQI SEVNESVLEG MSSHGHDDHE RKRSVPSQSR SPSGFSLTAW 120 DDSNENNFVI STSSNKRGKT INDDILNGLG AIDSQQAMAL EMATMERLMR VPENSVPCKI 180 RAKRGFATHP RSIAERERRT RISGKLKKLQ ELVPNMDKQT SYSDMLDLAV QHIKGLQGQI 240 EKLNEDLDHC TCGCKPNN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05805.1 | 3e-63 | bHLH family protein |