PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62038049-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 194aa MW: 21229.8 Da PI: 5.223 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.2 | 1.9e-05 | 94 | 132 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq AUR62038049-RA 94 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 132 7788999*********998.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MSSPISSSSS TIDPQMANNA QNGSPRFNVD HDLQQSNDLK LCNIPNNNLS SFNNNNGVPA 60 DSKNYIMEQQ STHQMPSKKP RFEPRASCPP FKVRKEKLGD RIAALQQLVA PFGKTDTASV 120 LMEAIGYIKF LQNQVEVKDD EFCVSDESIL TDDLRSRGLC LVPQSCMSYI NLASDATING 180 GIWPSPNFNP AGF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27660.1 | 5e-40 | bHLH family protein |