PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038015-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 406aa    MW: 44094 Da    PI: 6.9558
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038015-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.3e-12182228354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++   Er+RR++ N++++ Lr+l+P++     +K + a+i+  A+++I++L
  AUR62038015-RA 182 PKNFVTERQRRQNFNDKYQHLRSLVPNQ-----TKGDRASIVWDAINHINEL 228
                     567889*********************9.....8***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MEFQNPNLGN NNNGFSTTAT HLPMLPNCNP NPNDHDPNSW GPTNLAHEIG NGFTHFDENL  60
QPTTELLTLL HLPRCSFTSS TTNTTSLSFG KPSSPPPPSG SALGFLGDLN PPMMTLPHGG  120
GYNTGRGTSG IVGNGSSSSL FGGLDDGERN TINGIYQDGD HHIHGNGVFE FSKGDVKGGK  180
CPKNFVTERQ RRQNFNDKYQ HLRSLVPNQT KGDRASIVWD AINHINELRR TVGELKLLVE  240
KKRMSKERLK RHKTEHQDTP AGGTTSTGGG DHNSNGVDGP AAVKPDPDEE FSGSAAIQLR  300
SSWIQRKCKD TEVDVRIVDD DVTIKLVQRK KINCLLFVSR TLDELQLDLR HVAGGHVGDY  360
YSYLFNSKIC EGSSVYASAI ANTLIEVVER QYAAASVAVA PTTSF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.18e-59bHLH family protein