PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62037832-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 1059aa MW: 119702 Da PI: 8.8348

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62037832-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.6e-32	768	824	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkk+ers d++++ei+Y+geHnh+k AUR62037832-RA 768 DGYNWRKYGQKQVKGSEYPRSYYKCTHLKCPVKKKIERSL-DGQITEIVYKGEHNHPK 824 9*************************************.*************85 PP
2	WRKY	99	2.9e-31	969	1026	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkgs++prsYYrCts +C+v+k ver+ +d +++++tYeg+Hnhe AUR62037832-RA 969 GDGFRWRKYGQKVVKGSPYPRSYYRCTSVKCNVRKYVERALDDSRAFITTYEGRHNHE 1026 6********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1059 aa Download sequence
MIDLVVTKGP KRDYSIVKGP KDKFSRRFTA NLYTRVLSNG EKCDRDWLVY SKELDRAHIG 60 ERLKEHETGI EHVKNMSTWY ELRLRLQKNE TIDKTAQRLI EKEKDHWKNV LNRLISIVKF 120 LAKHSLAFRG SNEKLYQNSN GNFLGLIEML AEFDPIMQEH VKRITNDEIH FHYLGHSIQN 180 ELILLLAFAI KSEILKNIKQ AKYFSVILDC TPDISHQEQM SLIIRYVDVS TNSVSIEESF 240 LGFLNVNDTT GQGLFDVLQN ELKNLDLDIF DVRGQGYDNG SNMKGRHQGV QKKLLDINSR 300 AFYTPCGCHS LNLTLCDMAY SCNKAKDFFG VVQRIYTIFA KSTKRWQILK DNVKLLTLKS 360 LSSTRWESHI DSVKAIKCQM SDFREALLEV SDKDSDSKIC NEAKSLATNE LGDFEFLVSI 420 IIWFEVLSAI NMVSKLLQSN NMVIDVAMEK IKELISYFEG YRDTGFYIAL NNAKEIANEM 480 NIDPVFPQRR VIRRKKQFDE NLNTPSVELL GEESFRLESL DDISLKSSCS HFEQALTHNE 540 QSDVDGHELY VELKILLTIP VTVASAERSF SKLKLLKSYL RSTMLQERLN GLALIAIEND 600 LLEKLGMEVK EIDRVVITKP VASRPSCTGF RSFSKLHSGV VNASPPRTNA ISEMAVAAIK 660 PKTVRVDTSR GAPYSSSDNI SRVPDRSTVF KPLAKVVSKA TVSILLSMVD VSARQKKLHL 720 FSSQHSSNLP RVGLSESAKS PSMAQQMVEG EPQMMTSSIA GADRPSCDGY NWRKYGQKQV 780 KGSEYPRSYY KCTHLKCPVK KKIERSLDGQ ITEIVYKGEH NHPKPDHAKR SSSGVHGQEL 840 FAGTNQDPNI SDPKLHDNVC EKNEGFERQM SNENGMQLSK QSTFPGIVAP VCHPVDAEKN 900 IPSDKTVVDS AGLGGGCEES TKGLKANGGR IKNKRRKQDV QNSEAGKSGE GVQEPCIWVH 960 NINEPEIMGD GFRWRKYGQK VVKGSPYPRS YYRCTSVKCN VRKYVERALD DSRAFITTYE 1020 GRHNHEMPMK IMNLSAVLEQ ETQAPAGREI RTLMPIVS*

Sequence ? help Back to Top

Protein Sequence Length: 1059 aa Download sequence

MIDLVVTKGP KRDYSIVKGP KDKFSRRFTA NLYTRVLSNG EKCDRDWLVY SKELDRAHIG  60
ERLKEHETGI EHVKNMSTWY ELRLRLQKNE TIDKTAQRLI EKEKDHWKNV LNRLISIVKF  120
LAKHSLAFRG SNEKLYQNSN GNFLGLIEML AEFDPIMQEH VKRITNDEIH FHYLGHSIQN  180
ELILLLAFAI KSEILKNIKQ AKYFSVILDC TPDISHQEQM SLIIRYVDVS TNSVSIEESF  240
LGFLNVNDTT GQGLFDVLQN ELKNLDLDIF DVRGQGYDNG SNMKGRHQGV QKKLLDINSR  300
AFYTPCGCHS LNLTLCDMAY SCNKAKDFFG VVQRIYTIFA KSTKRWQILK DNVKLLTLKS  360
LSSTRWESHI DSVKAIKCQM SDFREALLEV SDKDSDSKIC NEAKSLATNE LGDFEFLVSI  420
IIWFEVLSAI NMVSKLLQSN NMVIDVAMEK IKELISYFEG YRDTGFYIAL NNAKEIANEM  480
NIDPVFPQRR VIRRKKQFDE NLNTPSVELL GEESFRLESL DDISLKSSCS HFEQALTHNE  540
QSDVDGHELY VELKILLTIP VTVASAERSF SKLKLLKSYL RSTMLQERLN GLALIAIEND  600
LLEKLGMEVK EIDRVVITKP VASRPSCTGF RSFSKLHSGV VNASPPRTNA ISEMAVAAIK  660
PKTVRVDTSR GAPYSSSDNI SRVPDRSTVF KPLAKVVSKA TVSILLSMVD VSARQKKLHL  720
FSSQHSSNLP RVGLSESAKS PSMAQQMVEG EPQMMTSSIA GADRPSCDGY NWRKYGQKQV  780
KGSEYPRSYY KCTHLKCPVK KKIERSLDGQ ITEIVYKGEH NHPKPDHAKR SSSGVHGQEL  840
FAGTNQDPNI SDPKLHDNVC EKNEGFERQM SNENGMQLSK QSTFPGIVAP VCHPVDAEKN  900
IPSDKTVVDS AGLGGGCEES TKGLKANGGR IKNKRRKQDV QNSEAGKSGE GVQEPCIWVH  960
NINEPEIMGD GFRWRKYGQK VVKGSPYPRS YYRCTSVKCN VRKYVERALD DSRAFITTYE  1020
GRHNHEMPMK IMNLSAVLEQ ETQAPAGREI RTLMPIVS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	4e-85	WRKY family protein