PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62037704-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 155aa MW: 18531.3 Da PI: 8.8025 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.1 | 6.5e-13 | 3 | 69 | 17 | 86 |
E--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 17 vlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 ++p +f+ ++ +g++ + ++l++es r W+vk+ ++++ ++++GW+eF+ n+L Df+vF +++ AUR62037704-RA 3 SIPVSFL-RYleeelQGQPLK--SVVLMTESQRHWDVKI--EGGR---YFKDGWQEFCLYNQLGMDDFLVFIHQS 69 7999999.5558877667655..6***************..6665...79*********************9643 PP | |||||||
2 | B3 | 55.3 | 1.2e-17 | 77 | 150 | 17 | 92 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 +lp +f +++g + + + ++tl d + sW+v+l+++++++++++++GW++F an+L+ gD++ F+l + +++++ AUR62037704-RA 77 YLPMRFSRSNGFV-NINYDMTLVDVDDMSWRVRLTFNRNRRQCYIKRGWSSFQAANNLNPGDILSFQLLR-TGKRP 150 69********888.5789*************************************************987.44445 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MQSIPVSFLR YLEEELQGQP LKSVVLMTES QRHWDVKIEG GRYFKDGWQE FCLYNQLGMD 60 DFLVFIHQSQ LLFHVEYLPM RFSRSNGFVN INYDMTLVDV DDMSWRVRLT FNRNRRQCYI 120 KRGWSSFQAA NNLNPGDILS FQLLRTGKRP ILKCY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31690.1 | 6e-16 | B3 family protein |