PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62037478-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 242aa MW: 27617.8 Da PI: 5.3795 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.1 | 1.2e-55 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k++l e+i+e+d+y++ePw+Lp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWk+tgkd++v AUR62037478-RA 6 LPPGFRFHPTDEELVAYYLKRKINGHKIDL-EIIPEIDLYQFEPWELPsKsLLPSNDLEWYFFSPRDRKYPNGSRTNRATKAGYWKSTGKDRKVN 99 79****************************.99***************5334455677************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + ++vg+kktLv+y+grap+g+++dWvmheyrl AUR62037478-RA 100 S-QMRAVGMKKTLVYYQGRAPNGHRSDWVMHEYRL 133 *.9999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MAPVALPPGF RFHPTDEELV AYYLKRKING HKIDLEIIPE IDLYQFEPWE LPSKSLLPSN 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK STGKDRKVNS QMRAVGMKKT LVYYQGRAPN 120 GHRSDWVMHE YRLDEGECEI PSGLQDAYAL CRVFKKTSIN ISNNIASSSQ EHSFTNIVQI 180 SSDQSSSIDM YTEGRCEDFE SSDYSIPIER CSTSATHGSS SSLCDIGDGQ WMQYLNEDEF 240 C* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-94 | NAC family protein |