PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62037392-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family TCP
Protein Properties Length: 294aa    MW: 31521.6 Da    PI: 7.7351
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62037392-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP112.18e-3522131166
             TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............................. 65 
                     a+g+kdrhsk+ T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak++i++l ++                              
  AUR62037392-RA  22 ATGRKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDKLDELppwdptagpsngvdvnvgstdftvgdnsgs 116
                     589**************************************************************999996666666666555555555543222 PP

             TCP  66 ..............s 66 
                                   +
  AUR62037392-RA 117 ssfyapqcvdtqslG 131
                     222222222222110 PP

Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MGLKSTTGGE IVQVQGGHII RATGRKDRHS KVFTAKGPRD RRVRLSAHTA IQFYDVQDRL  60
GYDRPSKAVD WLIKKAKASI DKLDELPPWD PTAGPSNGVD VNVGSTDFTV GDNSGSSSFY  120
APQCVDTQSL GDSMKSFFPT NNTSGENSIS FQNYQHEFIA RGGSQNNEDL CLSLHTLQDP  180
EGVRNGQHQQ THSNHNSGLF QGSGSSMGFD VGTGGWPESQ QQQQDLGRFA RMFGWPSGGS  240
AGGEGRGGML FNPSPLQQGP MTTSTYSQRG PLQSSFSSLM TTSNAAKGAR DIP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.22e-64TCP family protein