PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62037392-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | TCP | ||||||||
Protein Properties | Length: 294aa MW: 31521.6 Da PI: 7.7351 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 112.1 | 8e-35 | 22 | 131 | 1 | 66 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............................. 65 a+g+kdrhsk+ T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak++i++l ++ AUR62037392-RA 22 ATGRKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDKLDELppwdptagpsngvdvnvgstdftvgdnsgs 116 589**************************************************************999996666666666555555555543222 PP TCP 66 ..............s 66 + AUR62037392-RA 117 ssfyapqcvdtqslG 131 222222222222110 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MGLKSTTGGE IVQVQGGHII RATGRKDRHS KVFTAKGPRD RRVRLSAHTA IQFYDVQDRL 60 GYDRPSKAVD WLIKKAKASI DKLDELPPWD PTAGPSNGVD VNVGSTDFTV GDNSGSSSFY 120 APQCVDTQSL GDSMKSFFPT NNTSGENSIS FQNYQHEFIA RGGSQNNEDL CLSLHTLQDP 180 EGVRNGQHQQ THSNHNSGLF QGSGSSMGFD VGTGGWPESQ QQQQDLGRFA RMFGWPSGGS 240 AGGEGRGGML FNPSPLQQGP MTTSTYSQRG PLQSSFSSLM TTSNAAKGAR DIP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 2e-64 | TCP family protein |